This repository contains the Java implementation and R-integration workflow for the characterization of complex biochemical mixtures consisting of linear chains, e.g. Heparan Sulfate (HS).
This work reproduces the mathematical modeling described in: > “Combining measurements to estimate properties and characterization extent of complex biochemical mixtures; applications to Heparan Sulfate.” > Scientific Reports 6, 24829 (2016). DOI: 10.1038/srep24829
rJava, ggplot2, and
patchwork packages)Clone the repository and build the JAR with dependencies:
git clone [https://github.com/JoelRMath/heparan-sulfate.git](https://github.com/JoelRMath/heparan-sulfate.git)
cd heparan-sulfate
mvn clean package
The resulting JAR will be located in the target/ directory and can be called directly from R as demonstrated in the Figure Examples.
Maintained by Joel R. Pradines